Blar i NTNU Open på forfatter "Gaudet, Pascale"

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    • BioCreative III interactive task: an overview 

      Arighi, Cecilia N; Roberts, Phoebe M; Shashank, Agarwal; Bhattacharya, Sanmitra; Gianni, Cesareni; Chatr-aryamontri, Andrew; Clematide, Simon; Gaudet, Pascale; Giglio, Michelle Gwinn; Harrow, Ian; Huala, Eva; Krallinger, Martin; Leser, Ulf; Li, Donghui; Liu, Feifan; Lu, Zhlyong; Maltais, Lois J; Okazaki, Naoaki; Perfetto, Livia; Rinaldi, Fabio; Sætre, Rune; Salgado, David; Srinivasan, Padmini; Thomas, Philippe E; Toldo, Luca; Hirschman, Lynette; Wu, Cathy H. (Journal article; Peer reviewed, 2011)
      Background: The BioCreative challenge evaluation is a community-wide effort for evaluating text mining and information extraction systems applied to the biological domain. The biocurator community, as an active user of ...

    • The gene regulation knowledge commons: the action area of GREEKC 

      Kuiper, Martin; Bonello, Joseph; Fernández-Breis, Jesualdo Tomás; Bucher, Philipp; Futschik, Matthias E; Gaudet, Pascale; Kulakovskiy, Ivan V.; Licata, Luana; Logie, Colin; Lovering, Ruth C.; Makeev, Vsevolod J; Orchard, Sandra; Panni, Simona; Perfetto, Livia; Sant, David; Schulz, Stefan M.; Vercruysse, Steven; Zerbino, Daniel; Lægreid, Astrid (Peer reviewed; Journal article, 2022)
      As computational modeling becomes more essential to analyze and understand biological regulatory mechanisms, governance of the many databases and knowledge bases that support this domain is crucial to guarantee reliability ...

    • The Minimum Information about a Molecular Interaction Causal Statement (MI2CAST) 

      Touré, Vasundra; Vercruysse, Steven; Acencio, Marcio Luis; Lovering, Ruth C.; Orchard, Sandra; Bradley, Glyn; Casals-Casas, Cristina; Chaouiya, Claudine; del-Toro, Noemi; Flobak, Åsmund; Gaudet, Pascale; Hermjakob, Henning; Hoyt, Charles Tapley; Licata, Luana; Lægreid, Astrid; Mungall, Christopher; Niknejad, Anne; Panni, Simona; Perfetto, Livia; Porras, Pablo; Pratt, Dexter; Saez-Rodriguez, Julio; Thieffry, Denis; Thomas, Paul; Türei, Dénes; Kuiper, Martin (Peer reviewed; Journal article, 2020)
      Motivation A large variety of molecular interactions occurs between biomolecular components in cells. When a molecular interaction results in a regulatory effect, exerted by one component onto a downstream component, a ...